The Sequence Manipulation Suite
Select menu items on the right side to start sequence analysis.
The Sequence Manipulation Suite is a collection of JavaScript programs for generating, formatting, and analyzing short DNA and protein sequences. It is commonly used by molecular biologists, for teaching, and for program and algorithm testing.
See the about the Sequence Manipulation Suite page for more information about individual Sequence Manipulation Suite programs.
You can easily mirror the Sequence Manipulation Suite on your own web site, or you can use it off-line.
This version of the Sequence Manipulation Suite represents a complete re-write of the previous version. The new version is much faster and has many new features. The previous version of the Sequence Manipulation Suite can still be accessed.
Send questions and comments to stothard@ualberta.ca.
Menu
Format Conversion
>Combine FASTA
>EMBL to FASTA
>EMBL Feature Extractor
>EMBL Trans Extractor
>Filter DNA
>Filter Protein
>GenBank to FASTA
>GenBank Feature Extractor
>GenBank Trans Extractor
>One to Three
>Range Extractor DNA
>Range Extractor Protein
>Reverse Complement
>Three to One
Sequence Analysis
>Codon Plot
>Codon Usage
>DNA Pattern Find
>DNA Stats
>Fuzzy Search DNA
>Fuzzy Search Protein
>Ident and Sim
>Multi Rev Trans
>Mutate for Digest
>ORF Finder
>Pairwise Align DNA
>Pairwise Align Protein
>PCR Products
>Protein Isoelectric Point
>Protein Molecular Weight
>Protein Pattern Find
>Protein Stats
>Restriction Digest
>Restriction Summary
>Reverse Translate
>Translate
Sequence Figures
>Color Align Conservation
>Color Align Properties
>Group DNA
>Group Protein
>Primer Map
>Restriction Map
>Translation Map
Random Sequences