Technique / Bioinformatics / Microarray data analysis
Microarray Software Comparison
Microarray Software Comparison
Comparision of software used in microarray analysis (by Leung Yuk Fai, Harvard University)
Software includes:
Probe/primer design software
Image analysis software
Data preprocessing software
Data mining software
Turnkey/Enterprise system
Comprehensive software
Specific analysis software
Extensions of existing data mining software
Statistics software and technical programming languages
MATLAB M-files/tools for microarray analysis
R packages for microarray analysis
SAS macro codes for microarray analysis
SNPs analysis software
Database/Laboratory Information Management System (LIMS) software
Public Microarray Database and Gene Expression Database
Data annotation software
Accessory software
Network/Pathway reconstruction and analysis software
Tissue microarray software
arrayCGH software

The Microarray protocol from Brown's lab

Literature on Microarray Data Analysis

The MicroArray Explorer

Bibliography on microarray data analysis

Collection of papers on microarray data analysis

RMA expression measure of Affy chips (Introduction and Papers)

Pather classification system gene expression data analysis
