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Text mining biomedical literatures (1)


Mass Spectrometry Data Analysis new protocol
The mass spec data analysis demonstration can be downloaded in word doc file. This example demonstrates a number of ways to classify mass spectrometry data and shows some statistical tools that can be used to look for potential disease markers. The data in thi ...

Data Mining and Text Mining for Bioinformatics European Workshop 2003 review
This page contains the papers in pdf format presented at the European Workshop on Data Mining and Text Mining for Bioinformatics, held at the European Conference on Machine Learning and the European Conference on Principles and Practice of Knowledge Discovery ...

Data Mining and Text Mining for Bioinformatics European Workshop 2004 review
Second European Workshop on Data Mining and Text Mining for Bioinformatics held in 24 September 2004, Pisa, Italy Table of content Cover, table of contents, and invited talks by Yves Moreau and Alfonso Valencia. * Hong Chai and Carlotta Domenicon ...

Dragon TF Association Miner new software
A free web data mining tool by Pan H et al., Institute for Infocomm Research, Singapore. Dragon TF Association Miner: a system for exploring transcription factor associations through text-mining. Pan H, Zuo L, Choudhary V, Zhang Z, Leow SH, Chong FT, Hua ...

FigSearch: a figure legend indexing and classification system new software
A free figure legend mining tool by Liu F et al., Institute for Cancer Research, The Norwegian Radium Hospital. FigSearch: a figure legend indexing and classification system. Liu F, Jenssen TK, Nygaard V, Sack J, Hovig E. Department of Tumor Biology, ...

Data mining in bioinformatics using Weka new software
A free java software for data mining by Frank E et al., University of Waikato, New Zealand. Weka is a collection of machine learning algorithms for data mining tasks. The algorithms can either be applied directly to a dataset or called from your own Java co ...

Genepredictions database for protein function prediction new software
The "Genepredictions" database for protein functional predictions is created by Ross King et al., University of Wales, UK. It is intended to act as an open repository for predictions for any organism. Reference: Confirmation of data mining based predicti ...

BioRAT: extracting biological information from full-length papers new software
A free software for text mining by Corney DP et al., University of college, UK. A large and growing amount of information is published every year in scientific journals. In the biomedical field, there are thousands of journals, each publishing many issues annu ...

BITOLA - Biomedical Discovery Support System software
BITOLA is an interactive literature-based biomedical discovery support system (available in either cgi-bin version or java applet version). The purpose of the system is to help the biomedical researchers make new discoveries by discovering potentially new rela ...

MILANO - Microarray Literature-based Annotation software
This program was written by Ran Rubinstein at The Hebrew University of Jerusalem, Israel. It performs automatic searches in PubMed or the GeneRIF collection for articles containing co-occurrences of search terms with a list of genes (e.g. from a microarray exp ...

iProLINK: integrated Protein Literature, INformation and Knowledge software
iProLINK is an integrated protein resource for literature mining with special focuses on bibliography mapping, annotation extraction, protein named entity recognition, and protein ontology development. Reference: iProLINK: an integrated protein resource ...

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