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        <title>Biowww.net RSS feed</title>
        <description><![CDATA[BioNews feeds from biowww dot net]]></description>
        <link>http://biowww.net/</link>
        <lastBuildDate>Fri, 16 May 2008 06:25:25 +0100</lastBuildDate>
        <generator>FeedCreator 1.7.2</generator>
        <item>
            <title>Mammalian TAP-tagging technique - general protocols</title>
            <link>http://biowww.net/detail-550.html</link>
            <description>Two step Tandem Affinity Purification (TAP) system to purify protein suitable for Mass Spectrometry analysis. (By Anne-Claude Ginras, 2003). ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>Recombinant protein expression and purification flowchart</title>
            <link>http://biowww.net/detail-694.html</link>
            <description>The Flowchart will help you to choose:

*	the right domain 
*	the right expression system 
*	how to optimize the expression levels of the target protein 
*	the right method for protein extraction and clarification 
*	the purification scheme 
*	the corre ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>Preparation of Glycerol Stocks and Thawing of E.Coli Stocks</title>
            <link>http://biowww.net/detail-1150.html</link>
            <description>The BL21 cells are fairly fussy in that, unlike other E. coli strains, their plasmids become unstable if the cells are stored in glycerol concentrations greater than 10%. For this reason, the cells should be stored in 8% glycerol and frozen quickly in liquid n ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>IPTG Induction of recombinant protein production</title>
            <link>http://biowww.net/detail-1149.html</link>
            <description>IPTG induction and bacterial growth
A introduction and experimental protocol on BL21 e.coli recombinant protein expression and induction with IPTG. (Structural biology Prote ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>TCA protein precipitation protocol</title>
            <link>http://biowww.net/detail-349.html</link>
            <description>From Bjorkerman lab at CIT. ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>Protocol for the Purification of Wnt Proteins</title>
            <link>http://biowww.net/detail-546.html</link>
            <description>Protocol by Karl Willert in Nusse Lab at Stanford University Medical School. ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>Removal of Nucleic Acids from Protein</title>
            <link>http://biowww.net/detail-631.html</link>
            <description>Methods using Polyethyleneimine (PEI) precipitation  and Streptomycin sulfate precipitation. By Dr. Mario Lebendiker at The Hebrew University of Jerusalem.
 ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>Recombinant protein characterization by analytical ultracentrifugation</title>
            <link>http://biowww.net/detail-695.html</link>
            <description>With Analytical Ultracentifugation (AUC) the following protein characteristics can be determined:

*	Native Molecular Mass 
*	Stoichiometry 
*	Assembly Models 
*	Conformation &amp; Shape 
*	Diffusion &amp; Sedimentation 
*	Assiociation 

Protocol from EMBL He ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>Storage of purified recombinant protein</title>
            <link>http://biowww.net/detail-696.html</link>
            <description>The method of choice depends completely on the stability of the protein and on when and how you want to use it later on. In general it is important to avoid storage conditions that are close to the stability limits of the protein (e.g. extreme pH or pH values  ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>Protein extraction from whole tissues for isoelectric focusing</title>
            <link>http://biowww.net/detail-873.html</link>
            <description>Protocol from University of Missouri -  Columbia Proteomics Center.

1. SDS extraction followed by acetone precipitation.
2. Phenol extraction followed by methanolic ammonium acetate precipitation. ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>Enhancing solubility during protein expression in e.coli</title>
            <link>http://biowww.net/detail-801.html</link>
            <description>A tech note from Novagen on protein solubility in e.coli expression system. The choice of vector and expression host can significantly increase the activity and amount of target protein present in the soluble fraction. Some suggestions are given in this tech n ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>Detergent used for protein biochemistry and proteomics study</title>
            <link>http://biowww.net/detail-869.html</link>
            <description>Properties of Detergents Table by Dr. Shaun D. Black (University of Texas Health Center at Tyler).

List of Purity, MW (monomer), CMC (mM),  CMC Conditions, Aggregation, MW (micelle) of ionic, non-ionic and Zwitterionic Detergents.

Detergent molecule has  ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>Purification Tricks for Recombinant Proteins</title>
            <link>http://biowww.net/detail-1156.html</link>
            <description>An introduction of recombinant protein purification and application tricks by Bill Campbell at Michigan Tech.

Recombinant proteins are made from cloned DNA sequences which usually encode an enzyme or protein with known function. Special vectors (a vector is ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>Protein purification protocols and resources</title>
            <link>http://biowww.net/detail-630.html</link>
            <description>A huge collection of protocols on protein purification by Dr. Mario Lebendiker at The Hebrew University of Jerusalem.
 ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>Dye-binding protein assay giving very low signals</title>
            <link>http://biowww.net/detail-35.html</link>
            <description>I've eluted some polyclonal antibodies from an antigen column, and 
 dialysed them into a suitable buffer - the strange thing is that 
 although the absorbance at 280nm indicates that the proteins are at a 
 certain, relatively high level (e.g. 1mg/ml), whe ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>Question about Protein A purification of IgG</title>
            <link>http://biowww.net/detail-57.html</link>
            <description>1. What is the molecular basis for the selective binding of IgG by protein 
 A? 
 2. What is the difference between Protein A and Protein G in relation to 
 their Ig class binding specificities? 
 
 ... ...
 
 ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>protein precipitation</title>
            <link>http://biowww.net/detail-135.html</link>
            <description>I am looking for a protein precipitation method for very low 
 concentrated samples (50ug/ml) I have tried chloroform methanol but that 
 doesn't work. My samples are in phosphate buffer + n-octylglucoside. ... ...
 
 ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>Bacterial protein expression and purification discussion</title>
            <link>http://biowww.net/detail-197.html</link>
            <description>I am working with the pBAD bacterial his tag expression system from 
 Invitrogen, and am trying to purify the his-tag protein. I have checked 
 a number of methods to lyse the cells to release the protein, but in 
 each case the vast majority of my protein  ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>His-tags and DNA-binding</title>
            <link>http://biowww.net/detail-203.html</link>
            <description>Has anyone come across a situation where a 6XHis tag has affected the 
 DNA-binding of a DNA-binding protein? (the pH is 8 so unlikely to be +ve 
 charge). I know the folding could be affected. Just wondered if anyone 
 had seen such a phenomenon...  ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>Troubleshooting affinity chromatography</title>
            <link>http://biowww.net/detail-775.html</link>
            <description>Affinity chromatography purification troubleshooting guide from Roche.

Problems: 
1. Tagged protein appears in washes, does not bind to affinity resin.
2. Tagged protein remains bound to column, does not elute in Elution Buffer.
3. Extra proteins in elua ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>His-tag protein purification</title>
            <link>http://biowww.net/detail-1412.html</link>
            <description>Use of His-tag to coprecipitate a GPCR with protein partners
		14.10.2003 10:18
I am working on GPCR-partners interactions, especially on PDZ type interactions.
I detected specific interactions by chromatography affinity using a peptide mimicking the C-ter  ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>Graphical codon usage analyser for gene expression experiments</title>
            <link>http://biowww.net/detail-1304.html</link>
            <description>Differences in codon usage among organisms can lead to a variety of problems concerning heterologous gene expression. The gcua tools display the codon bias in a graphical manner. 

Reference:

Monitoring dynamic expression of nuclear genes in Chlamydomonas ...</description>
            <author>biowww</author>
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