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        <title>Biowww.net RSS feed</title>
        <description><![CDATA[BioNews feeds from biowww dot net]]></description>
        <link>http://biowww.net/</link>
        <lastBuildDate>Mon, 21 Jul 2008 23:10:48 +0100</lastBuildDate>
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        <item>
            <title>Protocols for real time PCR titration</title>
            <link>http://biowww.net/detail-787.html</link>
            <description>A titration protocol for real-time PCR with figures (Dr Patrick SALMON, Geneva School of Medicine). ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>Genotyping mice by real-time qPCR</title>
            <link>http://biowww.net/detail-1305.html</link>
            <description>Real-time PCR prototocol for genotyping Ts65Dn mice (Don Liu, Cecilia Schmidt, Tim Billings, and Muriel T. Davisson, The Jackson Laboratory).

Genotyping Ts65Dn mice is based on doing simultaneous quantitative PCR amplification of a gene or genes in the Ts65 ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>Patti Lab Taqman Real time PCR protocol</title>
            <link>http://biowww.net/detail-1306.html</link>
            <description>Real-time quantitative multiplex RT -PCR (Taqman) protocol.

This is performed as a 2-step reaction:

1. cDNA synthesis from DNase I treated total RNA
2. multiplex real-time taqman PCR optimization and PCR.
This is a very detailed Taqman real time RT-PCR ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>Real-time PCR data analysis and reviews</title>
            <link>http://biowww.net/detail-1215.html</link>
            <description>A technical overview on real-time PCR including introduction, primer probe design, data analysis and some recent pdf review articles. (DNA facility, University of Iowa) ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>Absolute quantification in real-time RT-PCR</title>
            <link>http://biowww.net/detail-1324.html</link>
            <description>A nice review and collection of technique articles on absolute real-time PCR quantification. (edited by Michael W. Pfaffl) ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>Real-time PCR introduction</title>
            <link>http://biowww.net/detail-415.html</link>
            <description>A introduction of real-time PCR by M.Tevfik Dorak, MD, PhD.

It gives background information on real-time PCR, guidlines on designing probe/primer and conditions on performing PCR. ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>Real-Time PCR Method</title>
            <link>http://biowww.net/detail-591.html</link>
            <description>A background introduction on real-time PCR technique (Davidson college, Dept. of Biology).

Real-time PCR is able to detect sequence-specific PCR products as they accumulate in &quot;real-time&quot; during the PCR amplification process. As the PCR product of interest  ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>Real-Time PCR Vs. Traditional PCR</title>
            <link>http://biowww.net/detail-592.html</link>
            <description>This PDF tutorial will discuss the evolution of traditional PCR methods towards the use of Real-Time chemistry and instrumentation for accurate quantitation (Applied biosystems). ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>SYBR Green Real-time PCR</title>
            <link>http://biowww.net/detail-1135.html</link>
            <description>A pdf powerpoint overview on SYBR green real-time PCR. It discussed different methods, data analysis using delta-CT etc (47 pages). (www.gene-quantification.info)

SYBR-green real-time is perhaps the best way to quantify gene expression in large scale with h ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>Introduction to Quantitative PCR: Methods and Application Guide</title>
            <link>http://biowww.net/detail-1136.html</link>
            <description>Stratagen real-time PCR techbook. It is downloadable as a 50 pages pdf file.

Table of Contents:

Real-Time vs. Endpoint Quantitative PCR ............................................................................................................... ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>Ten Most Common Real-Time qRT-PCR Pitfalls</title>
            <link>http://biowww.net/detail-1330.html</link>
            <description>List of 10 possible reasons for an unsuccessful real-time PCR (Ambion inc.)

More detailed description can be found from this page.

Poor primer and probe design.
Using poor quality RNA.
Not using &quot;master mixes&quot;.
Introducing cross-contamination. 
Not u ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>Real time PCR</title>
            <link>http://biowww.net/detail-86.html</link>
            <description>We are planning to have a new Real Time PCR machine in our lab but still in 
 puzzle to find the best. Can anyone ... ...
 ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>Semi-quantitative PCR</title>
            <link>http://biowww.net/detail-111.html</link>
            <description>I have to do semi-quantitative PCR in order to study the regulation of 
 expression of receptors mRNA. I've already done optimization of annealing 
 temp., MgCl2 conc., etc... 
 If I want to compare the level of two different mRNA in response of a 
 stimul ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>Real-time PCR protocol and troubleshooting</title>
            <link>http://biowww.net/detail-420.html</link>
            <description>Real-time PCR protocol with troubleshooting guide (from primersbank)

Reference:

Xiaowei Wang and Brian Seed (2003) A PCR primer bank for quantitative gene expression analysis. Nucleic Acids Research 31(24): e154; pp.1-8. ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>Real Time PCR Primer and Probe Database</title>
            <link>http://biowww.net/detail-417.html</link>
            <description>This is a public database holding real time PCR primers and probes for popular chemistries (SYBR Green I, Taqman, Hybridisation Probes, Molecular Beacon) to prevent time-consuming primer design and experimental optimisation. 

Reference:

PATTYN, F., SPELE ...</description>
            <author>biowww</author>
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        <item>
            <title>PCR Primer bank For Gene Expression Detection or Quantification</title>
            <link>http://biowww.net/detail-419.html</link>
            <description>PrimerBank is a public resource for PCR primers. These primers are designed for gene expression detection or quantification (real-time PCR). PrimerBank contains about 180,000 primers covering most known human and mouse genes. There are several ways to search f ...</description>
            <author>biowww</author>
        </item>
        <item>
            <title>Real-time qPCR Interactive Tutorial</title>
            <link>http://biowww.net/detail-1168.html</link>
            <description>Biocompare's qPCR Tutorial presents researchers with an overview of real-time qPCR, identifies the advantages and disadvantages of the various detection technologies, outlines the key issues for optimizing experimental design and offers a brief description of  ...</description>
            <author>biowww</author>
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